Project: iedb_v5
Class Carrier

Concrete Class Extends 
        :THING
 
Direct Instances:
None
 
Direct Subclasses:
None
 
Class Documentation:
Carrier is a protein to which a hapten is attached, thereby rendering the hapten immunogenic. Hapten is a substance that can react specifically with antibodies, but that is not itself immunogenic.


Template Slots
Slot name Documentation Type Allowed Values/Classes Cardinality Default
Carrier Name Name of the Carrier.

String    0:1   
Chemical Type Categorization of epitope compound as lipid, carbohydrate, DNA, RNA, peptide, organic, inorganic, etc.

String    0:1   
SMILES Structure SMILES notation for 2-D structure of epitope. SMILES stand for Simplified Molecular Input Line Entry Specification. SMILES is widely used as a general-purpose chemical nomenclature and data exchange format

String    0:1   
Source Species Source species selected from a hierarchical list of species from NCBI taxonomy database.

String    0:1   
Linear Sequence Linear sequence of amino acids, if molecule is a peptide. Other chemical structures will be captured using SMILES structure.

String    0:1   
GenBank ID Unique identifier of gene sequence in GenBank database

String    0:1   
SwissProt ID Unique identifier of protein sequence in Swiss-Prot database

String    0:1   
PDB ID Identification of source if structure is present in PDB.

String    0:1   

Return to class hierarchy


Generated on Thu Jun 02 12:31:05 PDT 2005